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Dynamic changes in the structure of microbial communities in Baltic Sea coastal seawater microcosms modified by crude oil, shale oil or diesel fuel
Signe Viggor, Jaanis Juhanson, Merike Jõesaar, Mario Mitt, Jaak Truu, Eve Vedler and Ain Heinaru Microbiological Research 168(7) 415 (2013) https://doi.org/10.1016/j.micres.2013.02.006
Characterization of hydrocarbon-degrading bacterial strains isolated from oil-polluted soil
Ana-Maria Tanase, Robertina Ionescu, Iulia Chiciudean, Tatiana Vassu and Ileana Stoica International Biodeterioration & Biodegradation 84 150 (2013) https://doi.org/10.1016/j.ibiod.2012.05.022
Phylogenetic diversity of bacterial communities associated with bioremediation of crude oil in microcosms
Hui Wang, Caixia Wang, Meng Lin, Xiangnan Sun, Chuanyuan Wang and Xiaoke Hu International Biodeterioration & Biodegradation 85 400 (2013) https://doi.org/10.1016/j.ibiod.2013.07.015
Composition of the microbial communities of bituminous constructions at natural oil seeps at the bottom of Lake Baikal
Subterminal oxidation of n-alkanes in achlorophyllous alga Prototheca sp.
Eiji Sakuradani, Yusuke Natsume, Yasushi Takimura, Jun Ogawa and Sakayu Shimizu Journal of Bioscience and Bioengineering 116(4) 472 (2013) https://doi.org/10.1016/j.jbiosc.2013.04.019
Katalytische, milde und selektive Oxyfunktionalisierung von linearen Alkanen: aktuelle Herausforderungen
Microbiological aspects study of bioremediation of diesel-contaminated soils by biopile technique
R. Chemlal, A. Tassist, M. Drouiche, H. Lounici, N. Drouiche and N. Mameri International Biodeterioration & Biodegradation 75 201 (2012) https://doi.org/10.1016/j.ibiod.2012.09.011
Treatment and Remediation of Petroleum-Contaminated Soils Using Selective Ornamental Plants
Biofilm lifestyle enhances diesel bioremediation and biosurfactant production in the Antarctic polyhydroxyalkanoate producer Pseudomonas extremaustralis
The influence of the herbicide 2-methyl-4-chlorophenoxyacetic acid (MCPA) on the mineralization of litter-derived alkanes and the abundance of the alkane monooxygenase gene (alkB) in the detritusphere of Pisum sativum (L.)
Identification of a novel Baeyer‐Villiger monooxygenase from Acinetobacter radioresistens: close relationship to the Mycobacterium tuberculosis prodrug activator EtaA
Plant litter and soil type drive abundance, activity and community structure of alkB harbouring microbes in different soil compartments
Stephan Schulz, Julia Giebler, Antonis Chatzinotas, Lukas Y Wick, Ingo Fetzer, Gerhard Welzl, Hauke Harms and Michael Schloter The ISME Journal 6(9) 1763 (2012) https://doi.org/10.1038/ismej.2012.17
Diversity of flavin-binding monooxygenase genes (almA) in marine bacteria capable of degradation long-chain alkanes
Are alkane hydroxylase genes (alkB) relevant to assess petroleum bioremediation processes in chronically polluted coastal sediments?
Sandrine Paisse, Robert Duran, Frédéric Coulon and Marisol Goñi-Urriza Applied Microbiology and Biotechnology 92(4) 835 (2011) https://doi.org/10.1007/s00253-011-3381-5
Abundance and Diversity of n-Alkane-Degrading Bacteria in a Forest Soil Co-Contaminated with Hydrocarbons and Metals: A Molecular Study on alkB Homologous Genes
Regioselective ω-hydroxylation of medium-chain n-alkanes and primary alcohols by CYP153 enzymes from Mycobacterium marinum and Polaromonas sp. strain JS666
Daniel Scheps, Sumire Honda Malca, Helen Hoffmann, Bettina M. Nestl and Bernhard Hauer Organic & Biomolecular Chemistry 9(19) 6727 (2011) https://doi.org/10.1039/c1ob05565h
Alkane-oxidizing metalloenzymes in the carbon cycle
Characterization of the aerobic hydrocarbon-oxidizing enrichments from a high-temperature petroleum reservoir by comparative analysis of DNA- and RNA-derived clone libraries
Alcanivorax pacificus sp. nov., isolated from a deep-sea pyrene-degrading consortium
Qiliang Lai, Liping Wang, Yuhui Liu, et al.
International Journal of Systematic and Evolutionary Microbiology
61(6) 1370 (2011) https://doi.org/10.1099/ijs.0.022368-0
Review of Microbial Processes in the Near-Surface Environment and Their Implications for the Chemical Fingerprinting of Hydrocarbon Fuels
Oxidation of gasoline oxygenates by closely related non‐haem‐iron alkane hydroxylases in Pseudomonas mendocina KR1 and other n‐octane‐utilizing Pseudomonas strains
Occurrence, production, and export of lipophilic compounds by hydrocarbonoclastic marine bacteria and their potential use to produce bulk chemicals from hydrocarbons
Efraín Manilla-Pérez, Alvin Brian Lange, Stephan Hetzler and Alexander Steinbüchel Applied Microbiology and Biotechnology 86(6) 1693 (2010) https://doi.org/10.1007/s00253-010-2515-5
Degradation of hexane and other recalcitrant hydrocarbons by a novel isolate, Rhodococcus sp. EH831
Eun-Hee Lee, Jaisoo Kim, Kyung-Suk Cho, Yun Gyong Ahn and Geum-Sook Hwang Environmental Science and Pollution Research 17(1) 64 (2010) https://doi.org/10.1007/s11356-009-0238-x
Phytoremediation of an aged petroleum contaminated soil using endophyte infected and non-infected grasses
Comparison of Oil Degrading Microbial Communities in Sediments from the Persian Gulf and Caspian Sea
Mehdi Hassanshahian, Giti Emtiazi, Rouha Kasra Kermanshahi and Simone Cappello Soil and Sediment Contamination: An International Journal 19(3) 277 (2010) https://doi.org/10.1080/15320381003695215
Molecular characterization and expression analysis of a suite of cytochrome P450 enzymes implicated in insect hydrocarbon degradation in the entomopathogenic fungus Beauveria bassiana
Cage Escape Competes with Geminate Recombination during Alkane Hydroxylation by the Diiron Oxygenase AlkB
Rachel N. Austin, Kate Luddy, Karla Erickson, Marilla Pender‐Cudlip, Erin Bertrand, Dayi Deng, Ryan S. Buzdygon, Jan B. van Beilen and John T. Groves Angewandte Chemie International Edition 47(28) 5232 (2008) https://doi.org/10.1002/anie.200801184
alkB homologs in thermophilic bacteria of the genus Geobacillus
A turbine oil-degrading bacterial consortium from soils of oil fields and its characteristics
Hitoshi Ito, Reia Hosokawa, Masaaki Morikawa and Hidetoshi Okuyama International Biodeterioration & Biodegradation 61(3) 223 (2008) https://doi.org/10.1016/j.ibiod.2007.08.001
Growth of Streptomyces spp. from hydrocarbon-polluted soil on diesel and their analysis for the presence of alkane hydroxylase gene (alkB) by PCR
Ismail Saadoun, Mohammad Alawawdeh, Ziad Jaradat and Qotaiba Ababneh World Journal of Microbiology and Biotechnology 24(10) 2191 (2008) https://doi.org/10.1007/s11274-008-9729-z
Phylogenetic analysis of long-chain hydrocarbon-degrading bacteria and evaluation of their hydrocarbon-degradation by the 2,6-DCPIP assay
Cage Escape Competes with Geminate Recombination during Alkane Hydroxylation by the Diiron Oxygenase AlkB
Rachel N. Austin, Kate Luddy, Karla Erickson, Marilla Pender‐Cudlip, Erin Bertrand, Dayi Deng, Ryan S. Buzdygon, Jan B. van Beilen and John T. Groves Angewandte Chemie 120(28) 5310 (2008) https://doi.org/10.1002/ange.200801184
Crystal Structure of Long-Chain Alkane Monooxygenase (LadA) in Complex with Coenzyme FMN: Unveiling the Long-Chain Alkane Hydroxylase
Liu Li, Xueqian Liu, Wen Yang, Feng Xu, Wei Wang, Lu Feng, Mark Bartlam, Lei Wang and Zihe Rao Journal of Molecular Biology 376(2) 453 (2008) https://doi.org/10.1016/j.jmb.2007.11.069
Monitoring exogenous and indigenous bacteria by PCR-DGGE technology during the process of microbial enhanced oil recovery
The Cytochrome P450 Enzyme CYP96A15 Is the Midchain Alkane Hydroxylase Responsible for Formation of Secondary Alcohols and Ketones in Stem Cuticular Wax of Arabidopsis
Alexander Wentzel, Trond E. Ellingsen, Hans-Kristian Kotlar, Sergey B. Zotchev and Mimmi Throne-Holst Applied Microbiology and Biotechnology 76(6) 1209 (2007) https://doi.org/10.1007/s00253-007-1119-1
Cloning, expression, and characterization of a Baeyer–Villiger monooxygenase from Pseudomonas fluorescens DSM 50106 in E. coli
Profiling Mechanisms of Alkane Hydroxylase Activity In Vivo Using the Diagnostic Substrate Norcarane
Elena A. Rozhkova-Novosad, Jong-Chan Chae, Gerben J. Zylstra, Erin M. Bertrand, Marselle Alexander-Ozinskas, Dayi Deng, Luke A. Moe, Jan B. van Beilen, Michael Danahy, John T. Groves and Rachel N. Austin Chemistry & Biology 14(2) 165 (2007) https://doi.org/10.1016/j.chembiol.2006.12.007
Alkane hydroxylases involved in microbial alkane degradation
CYP153A6, a Soluble P450 Oxygenase Catalyzing Terminal-Alkane Hydroxylation
Enrico G. Funhoff, Ulrich Bauer, Inés García-Rubio, Bernard Witholt and Jan B. van Beilen Journal of Bacteriology 188(14) 5220 (2006) https://doi.org/10.1128/JB.00286-06
Cytochrome P450 Alkane Hydroxylases of the CYP153 Family Are Common in Alkane-Degrading Eubacteria Lacking Integral Membrane Alkane Hydroxylases
Engineering Cytochrome P450 BM3 for Terminal Alkane Hydroxylation
Peter Meinhold, Matthew W. Peters, Adam Hartwick, Alisha R. Hernandez and Frances H. Arnold Advanced Synthesis & Catalysis 348(6) 763 (2006) https://doi.org/10.1002/adsc.200505465
Isolation and characterization of a novel thermophilic Bacillus strain degrading long-chain n-alkanes